STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0G01332GLAFE_0G01332g1_1. (305 aa)    
Predicted Functional Partners:
LAFE_0D06700G
LAFE_0D06700g1_1.
   
 0.976
LAFE_0B09362G
LAFE_0B09362g1_1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.
    
 0.902
LAFE_0D09296G
LAFE_0D09296g1_1.
    
 0.894
LAFE_0H05666G
LAFE_0H05666g1_1.
    
 0.894
LAFE_0C10880G
LAFE_0C10880g1_1.
   
 0.839
LAFE_0C02762G
LAFE_0C02762g1_1.
  
 0.776
LAFE_0D02674G
LAFE_0D02674g1_1.
   
 0.772
LAFE_0G13366G
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
  
 0.766
LAFE_0E06788G
LAFE_0E06788g1_1; Belongs to the sterol desaturase family.
   
 0.762
LAFE_0F10616G
LAFE_0F10616g1_1.
   
 0.736
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.