STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0G01904GLAFE_0G01904g1_1. (1017 aa)    
Predicted Functional Partners:
LAFE_0H16226G
LAFE_0H16226g1_1.
     
 0.846
LAFE_0C03774G
LAFE_0C03774g1_1.
    
 
 0.664
LAFE_0F09494G
LAFE_0F09494g1_1.
    
 
 0.657
LAFE_0E12596G
LAFE_0E12596g1_1.
   
 0.636
LAFE_0D00628G
LAFE_0D00628g1_1; Belongs to the actin-binding proteins ADF family.
   
 0.630
LAFE_0E14158G
LAFE_0E14158g1_1.
    
 0.626
LAFE_0C06392G
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family.
   
 0.622
LAFE_0G06282G
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.620
LAFE_0H10946G
LAFE_0H10946g1_1.
   
 0.619
LAFE_0C11848G
LAFE_0C11848g1_1; Belongs to the actin family.
   
 0.614
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.