STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0G07228GLAFE_0G07228g1_1. (498 aa)    
Predicted Functional Partners:
LAFE_0G13036G
LAFE_0G13036g1_1.
  
 
0.914
LAFE_0G03972G
LAFE_0G03972g1_1.
  
  
 0.877
LAFE_0H04610G
LAFE_0H04610g1_1.
  
  
 0.869
LAFE_0H16226G
LAFE_0H16226g1_1.
  
 0.824
LAFE_0B12222G
LAFE_0B12222g1_1.
    
 0.788
LAFE_0H12508G
LAFE_0H12508g1_1.
    
 0.779
LAFE_0B10946G
LAFE_0B10946g1_1.
  
 
0.774
LAFE_0A08020G
LAFE_0A08020g1_1.
    
 0.736
LAFE_0H16116G
LAFE_0H16116g1_1; Belongs to the phosphohexose mutase family.
  
 0.726
LAFE_0H12948G
LAFE_0H12948g1_1; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.720
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.