STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0H04940GReticulon-like protein. (270 aa)    
Predicted Functional Partners:
LAFE_0G08614G
LAFE_0G08614g1_1; Belongs to the peptidase A1 family.
   
 0.798
LAFE_0G07206G
LAFE_0G07206g1_1; Belongs to the peptidase A1 family.
   
 0.798
LAFE_0B09714G
Protein YOP1.
    
 
 0.774
LAFE_0E14048G
LAFE_0E14048g1_1.
    
   0.753
LAFE_0G01750G
LAFE_0G01750g1_1.
    
   0.753
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.721
LAFE_0A01178G
LAFE_0A01178g1_1.
    
 
 0.592
LAFE_0B03598G
LAFE_0B03598g1_1.
     
 0.563
LAFE_0B09450G
LAFE_0B09450g1_1.
   
 
 0.550
LAFE_0B02014G
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.531
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.