STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0H05622GLAFE_0H05622g1_1. (763 aa)    
Predicted Functional Partners:
LAFE_0H09780G
LAFE_0H09780g1_1.
  
 
 0.637
LAFE_0H03642G
LAFE_0H03642g1_1.
   
 0.569
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.549
LAFE_0C02498G
LAFE_0C02498g1_1.
    
 
 0.533
LAFE_0D07492G
LAFE_0D07492g1_1.
   
 0.522
LAFE_0B01552G
LAFE_0B01552g1_1.
  
 
 
 0.520
LAFE_0B08702G
LAFE_0B08702g1_1; Belongs to the sterol desaturase family.
   
 
 0.518
LAFE_0A06744G
LAFE_0A06744g1_1.
   
 
 0.498
LAFE_0F13586G
LAFE_0F13586g1_1; Belongs to the cytochrome P450 family.
   
 0.492
LAFE_0F13630G
LAFE_0F13630g1_1.
  
 
  0.468
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.