STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0H09846GLAFE_0H09846g1_1. (1211 aa)    
Predicted Functional Partners:
LAFE_0D12266G
LAFE_0D12266g1_1.
    
 0.824
LAFE_0H17502G
LAFE_0H17502g1_1.
  
 
 0.753
LAFE_0C07646G
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.746
LAFE_0E05600G
LAFE_0E05600g1_1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
  
 0.714
LAFE_0H07294G
Small nuclear ribonucleoprotein Sm D3.
   
 0.687
LAFE_0B06876G
LAFE_0B06876g1_1.
  
 
 0.682
LAFE_0B02784G
LAFE_0B02784g1_1; Belongs to the DEAD box helicase family.
  
 0.679
LAFE_0A02828G
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.677
LAFE_0F13146G
LAFE_0F13146g1_1; Belongs to the GroES chaperonin family.
  
  
 0.675
LAFE_0B04808G
LAFE_0B04808g1_1.
  
 0.672
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.