Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LAFE_0C01134G | LAFE_0F03708G | A0A1G4M8Z3 | A0A1G4MEZ4 | LAFE_0C01134g1_1. | LAFE_0F03708g1_1. | 0.999 |
LAFE_0C01134G | LAFE_0G12244G | A0A1G4M8Z3 | A0A1G4MI86 | LAFE_0C01134g1_1. | LAFE_0G12244g1_1. | 0.999 |
LAFE_0C01134G | LAFE_0H11518G | A0A1G4M8Z3 | A0A1G4MKE9 | LAFE_0C01134g1_1. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
LAFE_0C01134G | LSM1 | A0A1G4M8Z3 | A0A1G4MHL9 | LAFE_0C01134g1_1. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.999 |
LAFE_0C01134G | LSM3 | A0A1G4M8Z3 | A0A1G4M6D1 | LAFE_0C01134g1_1. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
LAFE_0C01134G | LSM4 | A0A1G4M8Z3 | A0A1G4M8B9 | LAFE_0C01134g1_1. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
LAFE_0C01134G | LSM5 | A0A1G4M8Z3 | A0A1G4MKE3 | LAFE_0C01134g1_1. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
LAFE_0C08152G | LAFE_0F03708G | A0A1G4M9U7 | A0A1G4MEZ4 | Small nuclear ribonucleoprotein Sm D2. | LAFE_0F03708g1_1. | 0.995 |
LAFE_0C08152G | LAFE_0F15566G | A0A1G4M9U7 | A0A1G4MG06 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
LAFE_0C08152G | LAFE_0G12244G | A0A1G4M9U7 | A0A1G4MI86 | Small nuclear ribonucleoprotein Sm D2. | LAFE_0G12244g1_1. | 0.993 |
LAFE_0C08152G | LAFE_0H11518G | A0A1G4M9U7 | A0A1G4MKE9 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.998 |
LAFE_0C08152G | LSM1 | A0A1G4M9U7 | A0A1G4MHL9 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.704 |
LAFE_0C08152G | LSM3 | A0A1G4M9U7 | A0A1G4M6D1 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.988 |
LAFE_0C08152G | LSM4 | A0A1G4M9U7 | A0A1G4M8B9 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.993 |
LAFE_0C08152G | LSM5 | A0A1G4M9U7 | A0A1G4MKE3 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.993 |
LAFE_0C08152G | LSM8 | A0A1G4M9U7 | A0A1G4M7G7 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
LAFE_0F03708G | LAFE_0C01134G | A0A1G4MEZ4 | A0A1G4M8Z3 | LAFE_0F03708g1_1. | LAFE_0C01134g1_1. | 0.999 |
LAFE_0F03708G | LAFE_0C08152G | A0A1G4MEZ4 | A0A1G4M9U7 | LAFE_0F03708g1_1. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
LAFE_0F03708G | LAFE_0F15566G | A0A1G4MEZ4 | A0A1G4MG06 | LAFE_0F03708g1_1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.991 |
LAFE_0F03708G | LAFE_0G12244G | A0A1G4MEZ4 | A0A1G4MI86 | LAFE_0F03708g1_1. | LAFE_0G12244g1_1. | 0.999 |
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