STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0H13410GLAFE_0H13410g1_1. (610 aa)    
Predicted Functional Partners:
LAFE_0H08702G
Long chronological lifespan protein 2; Probable component of the endoplasmic reticulum-associated degradation (ERAD) pathway.
    
   0.954
LAFE_0E06062G
LAFE_0E06062g1_1.
   
0.819
LAFE_0B10814G
LAFE_0B10814g1_1; Belongs to the heat shock protein 70 family.
  
 0.740
LAFE_0E07030G
LAFE_0E07030g1_1; Belongs to the heat shock protein 70 family.
  
 0.740
LAFE_0A05358G
LAFE_0A05358g1_1; Belongs to the heat shock protein 70 family.
  
 0.731
LAFE_0A03950G
LAFE_0A03950g1_1.
   
 0.695
LAFE_0G09230G
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.687
LAFE_0H01706G
LAFE_0H01706g1_1.
  
 0.669
LAFE_0G15236G
LAFE_0G15236g1_1.
  
 0.663
LAFE_0C03400G
LAFE_0C03400g1_1.
  
 0.660
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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