STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0H12156GLAFE_0H12156g1_1. (630 aa)    
Predicted Functional Partners:
LAFE_0A06128G
LAFE_0A06128g1_1.
    
   0.954
LAFE_0F05930G
LAFE_0F05930g1_1.
    
   0.954
LAFE_0G02564G
LAFE_0G02564g1_1.
    
   0.954
LAFE_0E05710G
LAFE_0E05710g1_1.
    
 
 0.914
LAFE_0G14180G
LAFE_0G14180g1_1.
 
  
 
 0.899
LAFE_0G06194G
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
 
 0.872
LAFE_0D03246G
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.791
LAFE_0H03004G
LAFE_0H03004g1_1.
    
 
 0.773
LAFE_0G16446G
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.728
LAFE_0A01552G
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.667
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.