STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAFE_0H14202GLAFE_0H14202g1_1. (698 aa)    
Predicted Functional Partners:
LAFE_0E06568G
LAFE_0E06568g1_1.
   
 0.995
LAFE_0C01992G
LAFE_0C01992g1_1.
   
 0.977
LAFE_0G04126G
LAFE_0G04126g1_1.
   
 0.975
LAFE_0H04588G
LAFE_0H04588g1_1.
    
 
 0.964
LAFE_0D04940G
LAFE_0D04940g1_1.
    
 
 0.953
LAFE_0B10022G
LAFE_0B10022g1_1; Belongs to the actin family.
   
 0.950
LAFE_0B00496G
LAFE_0B00496g1_1.
    
 
 0.937
LAFE_0H13146G
LAFE_0H13146g1_1; Belongs to the actin family.
   
 0.927
LAFE_0F06986G
LAFE_0F06986g1_1; Belongs to the actin family.
   
 0.921
LAFE_0B05930G
LAFE_0B05930g1_1.
   
 0.890
Your Current Organism:
Lachancea fermentati
NCBI taxonomy Id: 4955
Other names: ATCC 58446, CBS 707, CCRC 21760, CCRC:21760, CECT 11056, DBVPG 6297, IFO 0479, L. fermentati, Zygosaccharomyces fermentati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.