STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRT14Regulator of rDNA transcription 14; Involved in ribosome biogenesis, probably through modulation of rDNA transcription; Belongs to the RRT14 family. (212 aa)    
Predicted Functional Partners:
C5DU43_ZYGRC
ZYRO0C13750p.
   
 
 0.993
C5E4M4_ZYGRC
ZYRO0E07282p.
   
 
 0.991
C5DXA6_ZYGRC
ZYRO0F03498p.
   
 
 0.720
C5E1L4_ZYGRC
ZYRO0G21912p.
   
 
 0.717
C5DWB7_ZYGRC
ZYRO0D13530p.
   
   0.708
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.705
C5DRQ9_ZYGRC
ZYRO0B10450p.
   
   0.692
C5DQ92_ZYGRC
ZYRO0A09636p.
   
   0.674
C5DP57_ZYGRC
ZYRO0A00594p.
   
 
 0.638
C5DY93_ZYGRC
ZYRO0F11242p.
   
 
 0.638
Your Current Organism:
Zygosaccharomyces rouxii
NCBI taxonomy Id: 559307
Other names: Z. rouxii CBS 732, Zygosaccharomyces rouxii CBS 732
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