STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUV65411.1Hypothetical protein; No homology to any previously reported sequences. (106 aa)    
Predicted Functional Partners:
CUV65409.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CUV65410.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
phnA
Alkylphosphonate uptake protein phnA; Function of strongly homologous gene; transporter.
       0.718
CUV65412.1
Putative CopG-like DNA-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.618
relE-2
Addiction module toxin, RelE/StbE; Function of strongly homologous gene; extrachromosomal origin.
       0.618
CUV65404.1
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; Function of strongly homologous gene; enzyme.
       0.613
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.613
CUV65406.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.613
CUV65407.1
Thioredoxin; Function of strongly homologous gene; enzyme.
       0.613
CUV65403.1
Putative oxidoreductase with FAD/NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.528
Your Current Organism:
Sulfurovum sp. enrichment
NCBI taxonomy Id: 497650
Other names: S. sp. enrichment culture clone C5, Sulfurovum sp. enrichment culture clone C5
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