STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUV66369.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (343 aa)    
Predicted Functional Partners:
CUV65706.1
Exported hypothetical protein, putative fragment of tetratricopeptide repeat protein; Homologs of previously reported genes of unknown function.
    
  0.826
aroC
Chorismate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
   0.819
rnc
Ribonuclease III (RNase III); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.800
rnhA
Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.800
CUV66248.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.791
CUV66254.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
 0.791
CUV66255.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
 0.791
CUV65113.1
DNA polymerase III subunit delta; Function of strongly homologous gene; enzyme.
  
     0.774
CUV66366.1
Putative LysM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.773
CUV66367.1
Exported hypothetical protein, putative rare lipoprotein A; No homology to any previously reported sequences.
       0.773
Your Current Organism:
Sulfurovum sp. enrichment
NCBI taxonomy Id: 497650
Other names: S. sp. enrichment culture clone C5, Sulfurovum sp. enrichment culture clone C5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.