STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21893.1KEGG: sus:Acid_5550 hypothetical protein. (307 aa)    
Predicted Functional Partners:
EDY21892.1
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; KEGG: sth:STH2011 manganese transport transcriptional regulator.
       0.773
EDY21894.1
Hypothetical protein.
       0.752
mntH
Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
     0.584
EDY21895.1
Hypothetical protein; KEGG: cau:Caur_1181 major facilitator superfamily MFS_1.
 
     0.522
EDY21890.1
PFAM: UspA domain protein; KEGG: sus:Acid_5624 Mn2+/Fe2+ transporter, NRAMP family.
       0.504
EDY18180.1
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
    
  0.484
EDY17046.1
PFAM: lipolytic protein G-D-S-L family; KEGG: pmo:Pmob_0436 lipolytic protein G-D-S-L family.
  
     0.461
EDY19429.1
PFAM: glycoside hydrolase family 16; KEGG: cth:Cthe_2809 glycoside hydrolase, family 16.
  
     0.440
EDY17572.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_5045 xylose isomerase domain protein TIM barrel.
  
     0.421
EDY21776.1
PFAM: cyclase family protein; KEGG: scl:sce1525 hypothetical protein.
  
     0.412
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.