STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21930.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pap:PSPA7_2179 hypothetical protein. (138 aa)    
Predicted Functional Partners:
EDY21928.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: rba:RB3932 probable TolQ protein.
 
   0.868
EDY15956.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: aeh:Mlg_1436 MotA/TolQ/ExbB proton channel.
  
   0.692
EDY22039.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: psb:Psyr_1633 MotA/TolQ/ExbB proton channel.
  
   0.687
EDY21486.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein.
  
   0.687
EDY21929.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A1028 biopolymer transport protein ExbD/TolR.
 
    
0.681
EDY17419.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpb:RPB_2220 MotA/TolQ/ExbB proton channel.
 
 
 0.653
EDY20664.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sus:Acid_7247 RNA polymerase, sigma-24 subunit, ECF subfamily.
  
 
 0.633
EDY17417.1
KEGG: rpa:RPA1353 hypothetical protein.
  
   0.583
EDY19885.1
Hypothetical protein; KEGG: ssc:100049648 basic proline-rich protein.
  
 
 0.574
EDY20383.1
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mca:MCA0668 TonB domain protein.
  
   0.563
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.