STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY22022.1KEGG: rba:RB11043 hypothetical protein. (248 aa)    
Predicted Functional Partners:
EDY17095.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.704
EDY18210.1
KEGG: rba:RB5008 hypothetical protein-transmembrane region and signal peptide prediction; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.700
EDY22023.1
Hypothetical protein.
       0.555
EDY17795.1
KEGG: sru:SRU_1812 hypothetical protein.
  
     0.523
EDY20030.1
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: fjo:Fjoh_0804 hypothetical protein.
  
  
  0.497
EDY20710.1
Protein tyrosine/serine phosphatase; KEGG: rba:RB3293 hypothetical protein-transmembrane prediction.
  
  
  0.476
EDY16775.1
KEGG: rba:RB3718 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.461
EDY22117.1
PFAM: PKD domain containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: chu:CHU_1052 hypothetical protein.
    
  0.459
EDY22356.1
PFAM: PKD domain containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: chu:CHU_1052 hypothetical protein.
    
  0.459
EDY17238.1
PFAM: NHL repeat containing protein; KEGG: det:DET1472 NHL/rhs/YD repeat protein.
    
  0.451
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.