node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDY19906.1 | EDY22087.1 | CfE428DRAFT_2495 | CfE428DRAFT_0212 | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | 0.466 |
EDY19906.1 | aspS | CfE428DRAFT_2495 | CfE428DRAFT_0986 | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.567 |
EDY19906.1 | tsf | CfE428DRAFT_2495 | CfE428DRAFT_2907 | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.716 |
EDY21255.1 | EDY22087.1 | CfE428DRAFT_1548 | CfE428DRAFT_0212 | KEGG: pth:PTH_2220 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: single-strand binding protein/Primosomal replication protein n; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein. | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | 0.500 |
EDY22086.1 | EDY22087.1 | CfE428DRAFT_0211 | CfE428DRAFT_0212 | Hypothetical protein. | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | 0.449 |
EDY22087.1 | EDY19906.1 | CfE428DRAFT_0212 | CfE428DRAFT_2495 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.466 |
EDY22087.1 | EDY21255.1 | CfE428DRAFT_0212 | CfE428DRAFT_1548 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | KEGG: pth:PTH_2220 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: single-strand binding protein/Primosomal replication protein n; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein. | 0.500 |
EDY22087.1 | EDY22086.1 | CfE428DRAFT_0212 | CfE428DRAFT_0211 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | Hypothetical protein. | 0.449 |
EDY22087.1 | aspS | CfE428DRAFT_0212 | CfE428DRAFT_0986 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.727 |
EDY22087.1 | rho | CfE428DRAFT_0212 | CfE428DRAFT_0213 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.597 |
EDY22087.1 | rplS | CfE428DRAFT_0212 | CfE428DRAFT_0567 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.522 |
EDY22087.1 | rpmF | CfE428DRAFT_0212 | CfE428DRAFT_3891 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: tpa:TP0807 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.453 |
EDY22087.1 | ruvA | CfE428DRAFT_0212 | CfE428DRAFT_4571 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.577 |
EDY22087.1 | tig | CfE428DRAFT_0212 | CfE428DRAFT_2711 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.435 |
EDY22087.1 | tsf | CfE428DRAFT_0212 | CfE428DRAFT_2907 | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.469 |
aspS | EDY19906.1 | CfE428DRAFT_0986 | CfE428DRAFT_2495 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.567 |
aspS | EDY22087.1 | CfE428DRAFT_0986 | CfE428DRAFT_0212 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein. | 0.727 |
aspS | rpmF | CfE428DRAFT_0986 | CfE428DRAFT_3891 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: tpa:TP0807 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.476 |
aspS | ruvA | CfE428DRAFT_0986 | CfE428DRAFT_4571 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.580 |
aspS | tig | CfE428DRAFT_0986 | CfE428DRAFT_2711 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.462 |