STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY22108.1PFAM: UspA domain protein; KEGG: pcu:pc0262 hypothetical protein. (622 aa)    
Predicted Functional Partners:
EDY20589.1
PFAM: Kelch repeat-containing protein; KEGG: scl:sce6691 hypothetical protein.
  
     0.744
EDY17795.1
KEGG: sru:SRU_1812 hypothetical protein.
  
     0.702
EDY16981.1
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: cau:Caur_2056 PAS sensor protein.
  
     0.653
EDY17412.1
PFAM: Kelch repeat-containing protein; KEGG: sus:Acid_3694 peptidase S7, flavivirus helicase (NS3).
  
     0.650
EDY16980.1
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1907 signal transduction histidine kinase, nitrogen specific, NtrB.
  
     0.650
EDY17803.1
TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; KEGG: sru:SRU_2413 protein of unknown function (DUF1550) family.
  
     0.633
EDY17229.1
KEGG: cpt:CpB0533 hypothetical protein.
  
     0.606
EDY22107.1
PFAM: amino acid permease-associated region; KEGG: pcu:pc0262 hypothetical protein.
 
    
0.605
EDY22109.1
Hypothetical protein.
       0.572
EDY22110.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_4578 putative GCN5-related N-acetyltransferase (GNAT).
       0.572
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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