STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21414.1PFAM: sodium:dicarboxylate symporter; KEGG: reu:Reut_A0277 C4-dicarboxylate transporter DctA; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (437 aa)    
Predicted Functional Partners:
EDY18309.1
PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase_; KEGG: rba:RB8262 proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.762
EDY17297.1
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bba:Bd1836 fatty oxidation complex, alpha subunit.
  
 
  0.706
EDY21415.1
Chromosome segregation ATPase-like protein; KEGG: lma:LmjF14.1120 kinesin K39, putative.
  
    0.532
EDY21838.1
PFAM: carbon starvation protein CstA; KEGG: gtn:GTNG_0525 carbon starvation protein A.
 
  
 0.494
EDY16596.1
Na+/proline symporter-like protein; KEGG: sus:Acid_3843 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.491
EDY16595.1
KEGG: sus:Acid_3843 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.463
EDY21413.1
Hypothetical protein.
       0.454
glsA-2
PFAM: cyclic nucleotide-binding; Glutaminase, core; KEGG: fre:Franean1_0296 cyclic nucleotide-binding protein; Belongs to the glutaminase family.
  
 
 0.442
EDY21243.1
PFAM: aminotransferase class-III; KEGG: dde:Dde_0417 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.422
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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