STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21538.1KEGG: rba:RB8181 hypothetical protein-transmembrane prediction. (179 aa)    
Predicted Functional Partners:
EDY21537.1
PFAM: protein of unknown function DUF1355; KEGG: rba:RB8181 hypothetical protein-transmembrane prediction.
      0.948
EDY21539.1
KEGG: rba:RB8186 hypothetical protein-signal peptide prediction.
       0.792
EDY21540.1
Hypothetical protein.
       0.773
EDY21535.1
KEGG: rba:RB8177 hypothetical protein-putative transmembrane protein.
       0.518
EDY21536.1
KEGG: rba:RB8177 hypothetical protein-putative transmembrane protein.
       0.516
EDY21534.1
KEGG: rba:RB8177 hypothetical protein-putative transmembrane protein.
       0.494
EDY21541.1
PFAM: PfkB domain protein; KEGG: sus:Acid_7084 PfkB domain protein.
       0.484
EDY21530.1
KEGG: rba:RB8174 hypothetical protein.
       0.401
EDY21532.1
TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; KEGG: rba:RB8176 similar to inter-alpha-trypsin inhibitor heavy chain H2 [precursor].
       0.401
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.