STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21604.1Membrane-associated protein-like protein; KEGG: gme:Gmet_1368 DedA. (217 aa)    
Predicted Functional Partners:
EDY21602.1
Hypothetical protein; KEGG: acr:Acry_2541 acetylornithine and succinylornithine aminotransferase.
       0.524
EDY21603.1
PFAM: aminotransferase class-III; KEGG: gme:Gmet_0204 acetylornithine and succinylornithine aminotransferase.
       0.524
EDY21601.1
KEGG: gbe:GbCGDNIH1_1948 ornithine aminotransferase.
       0.436
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.