STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21687.1PFAM: monooxygenase FAD-binding; tryptophan halogenase; KEGG: xac:XAC4102 hydroxylase. (414 aa)    
Predicted Functional Partners:
EDY21686.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xac:XAC3496 hypothetical protein.
 
    0.895
EDY21689.1
KEGG: sco:SCO0894 membrane protein.
 
     0.834
EDY21688.1
PFAM: AMP-dependent synthetase and ligase; KEGG: mca:MCA1569 long-chain fatty-acid-CoA ligase, putative.
 
     0.821
EDY17034.1
KEGG: gsu:GSU0242 acyl carrier protein.
  
     0.764
EDY21684.1
KEGG: gme:Gmet_1699 hypothetical protein.
  
     0.756
EDY17636.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: gme:Gmet_2121 twin-arginine translocation pathway signal.
  
 
 0.675
EDY21700.1
KEGG: noc:Noc_1747 hypothetical protein.
  
     0.642
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
  
 0.598
EDY21584.1
TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: saq:Sare_0808 geranylgeranyl reductase.
  
     0.580
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.578
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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