STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21699.1Exporter of the RND superfamily protein-like protein; KEGG: gsu:GSU0456 hypothetical protein. (720 aa)    
Predicted Functional Partners:
EDY21700.1
KEGG: noc:Noc_1747 hypothetical protein.
 
     0.918
EDY21697.1
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: scl:sce7303 putative dehyrogenase.
 
     0.880
EDY21701.1
PFAM: lipid A biosynthesis acyltransferase; KEGG: gsu:GSU0243 hypothetical protein.
     0.749
EDY21698.1
Hypothetical protein.
       0.718
EDY15788.1
TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: ppd:Ppro_1192 radical SAM domain protein.
  
     0.657
EDY15838.1
TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: aba:Acid345_1740 squalene cyclase.
 
     0.653
EDY17034.1
KEGG: gsu:GSU0242 acyl carrier protein.
  
     0.630
EDY21987.1
PFAM: purine or other phosphorylase family 1; KEGG: mex:Mext_3461 hypothetical protein.
 
     0.619
EDY21682.1
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: xcv:XCV4175 putative halogenase.
  
     0.556
EDY17524.1
Tryptophan halogenase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: rba:RB390 probable alkylhalidase.
  
     0.542
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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