STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21750.1KEGG: sde:Sde_2872 hypothetical protein. (570 aa)    
Predicted Functional Partners:
EDY21751.1
PFAM: Carbohydrate-binding CenC domain protein; KEGG: saq:Sare_4907 hypothetical protein.
      0.788
EDY22436.1
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: hau:Haur_2138 cellulose-binding family II.
  
 
  0.492
EDY21919.1
PFAM: lipolytic protein G-D-S-L family; KEGG: rba:RB3639 hypothetical protein.
  
 
  0.476
EDY17944.1
SMART: Parallel beta-helix repeat; KEGG: cpy:Cphy_1873 carbohydrate binding family 6.
 
     0.457
EDY21218.1
KEGG: pde:Pden_0843 hypothetical protein.
  
    0.454
EDY16886.1
Carbohydrate binding family 6; PFAM: Fibronectin type III domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: sco:SCO7170 secreted sugar hydrolase.
  
 
  0.454
EDY21749.1
Hypothetical protein.
       0.443
EDY22010.1
PFAM: lipolytic protein G-D-S-L family; KEGG: rba:RB3639 hypothetical protein.
  
 
  0.435
EDY17682.1
KEGG: bmn:BMA10247_0632 lipoprotein, putative.
  
  
  0.432
EDY18256.1
KEGG: sco:SCO7037 secreted protein.
  
     0.422
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.