STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21764.1PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rca:Rcas_4296 protein of unknown function DUF224 cysteine-rich region domain protein. (467 aa)    
Predicted Functional Partners:
EDY21765.1
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: gur:Gura_2199 FAD linked oxidase domain protein.
 
  0.984
EDY21705.1
PFAM: FAD linked oxidase domain protein; KEGG: tth:TTC0129 (S)-2-hydroxy-acid oxidase chain D.
 
  0.946
EDY21954.1
PFAM: FAD linked oxidase domain protein; KEGG: gme:Gmet_3245 FAD linked oxidase-like.
 
  0.914
EDY19368.1
PFAM: protein of unknown function DUF162; KEGG: chu:CHU_1019 possible ferrodoxin.
 
 0.892
EDY21704.1
PFAM: FAD linked oxidase domain protein; KEGG: tth:TTC0128 (S)-2-hydroxy-acid oxidase subunit GlcE.
 
 
  0.885
EDY19369.1
PFAM: protein of unknown function DUF162; KEGG: chu:CHU_0614 hypothetical protein.
 
 
 0.853
EDY18147.1
Hypothetical protein.
  
 
 0.786
EDY18148.1
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0952 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.786
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.773
EDY16652.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.772
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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