STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21816.1TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sus:Acid_3408 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (415 aa)    
Predicted Functional Partners:
EDY21815.1
PFAM: acriflavin resistance protein; KEGG: sus:Acid_3409 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.970
EDY15988.1
PFAM: acriflavin resistance protein; KEGG: sus:Acid_3409 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.880
EDY16761.1
PFAM: acriflavin resistance protein; KEGG: sus:Acid_3409 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.879
EDY22259.1
PFAM: acriflavin resistance protein; KEGG: sus:Acid_7568 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.867
EDY20739.1
PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1597 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.754
EDY20740.1
PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1597 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.753
EDY22258.1
PFAM: outer membrane efflux protein; KEGG: sus:Acid_7567 outer membrane efflux protein.
  
  0.541
EDY19530.1
KEGG: mxa:MXAN_0988 cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.508
EDY19864.1
PFAM: protein of unknown function DUF214; KEGG: amr:AM1_D0150 ABC transporter, permease protein.
  
 
 0.504
EDY20205.1
PFAM: acriflavin resistance protein; KEGG: pca:Pcar_2244 AcrB/AcrD/AcrF cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.502
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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