STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21870.1ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2536 ABC transporter-related protein. (228 aa)    
Predicted Functional Partners:
EDY19928.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU2650 amino acid ABC transporter, permease protein, putative.
  
 0.976
EDY21871.1
KEGG: dvl:Dvul_2342 protein of unknown function DUF140.
    
  0.828
EDY18391.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3611 ABC transporter related.
  
  
  0.765
EDY20080.1
KEGG: psa:PST_2521 lipoprotein releasing system, ATP-binding protein.
  
     0.761
EDY21442.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvu:BVU_2511 ABC transporter ATP-binding protein.
  
  
  0.729
EDY18773.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: deh:cbdb_A1530 ATPase, AAA family protein; Belongs to the AAA ATPase family.
  
     0.696
EDY17293.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin).
  
  
 0.692
rpsI
PFAM: ribosomal protein S9; KEGG: sat:SYN_00233 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
  
     0.686
EDY21035.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ter:Tery_2297 AAA ATPase, central region.
  
     0.673
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.659
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.