STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20899.1KEGG: rba:RB9469 hypothetical protein-putative transmembrane protein. (291 aa)    
Predicted Functional Partners:
EDY18098.1
TIGRFAM: membrane-bound dehydrogenase domain protein; KEGG: rba:RB3322 similar to cytochrome c.
 
    0.699
EDY16758.1
KEGG: rba:RB9713 probable large, multifunctional secreted protein.
  
     0.679
EDY18659.1
KEGG: rba:RB9713 probable large, multifunctional secreted protein.
  
     0.678
EDY19816.1
TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; KEGG: rba:RB3322 similar to cytochrome c.
  
    0.666
EDY18844.1
TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rba:RB3322 similar to cytochrome c.
  
     0.653
EDY17284.1
Hypothetical protein; KEGG: rba:RB3322 similar to cytochrome c.
 
    0.647
EDY18971.1
TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; KEGG: rba:RB12351 similar to C-type cytochrome.
  
    0.643
EDY20638.1
KEGG: rba:RB7476 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.624
EDY22391.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; SMART: LamG domain protein jellyroll fold domain protein; KEGG: sus:Acid_3952 protein of unknown function DUF1549.
  
     0.620
EDY22071.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: sus:Acid_0974 protein of unknown function DUF1549.
  
     0.612
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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