STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20911.1KEGG: sus:Acid_1474 hypothetical protein. (326 aa)    
Predicted Functional Partners:
EDY20905.1
PFAM: metallophosphoesterase; KEGG: rxy:Rxyl_2290 metallophosphoesterase.
 
     0.518
EDY20912.1
Hypothetical protein.
       0.497
EDY20910.1
UDP-glucose--hexose-1-phosphate uridylyltransferase; KEGG: gme:Gmet_3176 galactose-1-phosphate uridyl transferase, class I.
       0.482
EDY18774.1
KEGG: scl:sce4407 hypothetical protein.
  
     0.472
EDY17663.1
KEGG: cpt:CpB0596 hypothetical protein.
  
     0.460
EDY20909.1
PFAM: acylphosphatase; KEGG: bay:RBAM_007840 YflL.
       0.452
EDY17075.1
KEGG: cau:Caur_3783 hypothetical protein.
  
     0.423
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.