STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20989.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
EDY20984.1
KEGG: cth:Cthe_1139 hypothetical protein.
       0.773
EDY20985.1
Hypothetical protein.
       0.773
EDY20986.1
Hypothetical protein.
       0.773
EDY20987.1
KEGG: cth:Cthe_1141 hypothetical protein.
       0.773
EDY20988.1
Hypothetical protein.
       0.773
EDY20981.1
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: cth:Cthe_1136 serine/threonine protein kinase with TPR repeats.
       0.746
EDY20982.1
KEGG: cth:Cthe_1137 hypothetical protein.
       0.746
EDY20983.1
PFAM: protein of unknown function DUF87; KEGG: cth:Cthe_1138 protein of unknown function DUF87.
       0.746
EDY20990.1
Hypothetical protein; KEGG: cth:Cthe_1144 restriction modification system DNA specificity domain.
       0.668
EDY20991.1
PFAM: N-6 DNA methylase; KEGG: cth:Cthe_1145 N-6 DNA methylase.
       0.668
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.