STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21015.1PFAM: GCN5-related N-acetyltransferase; KEGG: mja:MJ1207 protease synthase and sporulation negative regulator Pai1, putative. (148 aa)    
Predicted Functional Partners:
EDY21014.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mac:MA4513 hypothetical protein.
       0.773
EDY21021.1
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: stp:Strop_0681 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
  0.611
EDY21018.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nca:Noca_4547 methyltransferase type 11.
   
   0.585
EDY21016.1
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rso:RSp0276 cysteine synthase A.
  
    0.557
EDY21017.1
ABC transporter-related protein; PFAM: ABC transporter related; KEGG: rci:RCIX2175 putative excinuclease ABC, ATPase subunit.
       0.556
EDY21019.1
Hypothetical protein.
       0.556
EDY21020.1
Hypothetical protein.
       0.556
EDY21022.1
Hypothetical protein.
       0.549
EDY21023.1
SMART: Elongator protein 3/MiaB/NifB; KEGG: hma:rrnAC3263 hypothetical protein.
       0.549
EDY20363.1
TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG: mca:MCA2084 N-acetylglutamate synthase; Belongs to the acetyltransferase family.
    
 0.526
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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