STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21048.1PFAM: ParB domain protein nuclease; KEGG: mms:mma_2756 phage related DNA methyltransferase. (268 aa)    
Predicted Functional Partners:
EDY21281.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sbm:Shew185_2566 cobyrinic acid ac-diamide synthase.
  
 
 0.790
EDY17010.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pca:Pcar_3139 partition protein, PAR-like.
  
 
 0.790
EDY21056.1
PFAM: portal protein lambda; KEGG: dvu:DVU2171 portal protein.
 
    0.641
EDY21047.1
Hypothetical protein.
       0.636
EDY21266.1
Bacteriophage capsid protein-like protein; KEGG: syf:Synpcc7942_0733 phage portal protein, lambda.
 
    0.577
EDY21049.1
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein.
       0.555
EDY20502.1
PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: pca:Pcar_1451 homoserine dehydrogenase.
    
 0.509
sucC
succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
    0.506
EDY21045.1
KEGG: bvu:BVU_2840 hypothetical protein.
       0.491
EDY21046.1
KEGG: bvu:BVU_2840 hypothetical protein.
       0.491
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.