STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY21202.1PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2785 AMP-dependent synthetase and ligase. (471 aa)    
Predicted Functional Partners:
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
 
 0.967
EDY21615.1
Erythronolide synthase; PFAM: phosphopantetheine-binding; Beta-ketoacyl synthase; KEGG: hau:Haur_2416 beta-ketoacyl synthase.
 
 0.964
EDY22237.1
Erythronolide synthase; PFAM: Methyltransferase type 11; Methyltransferase type 12; Beta-ketoacyl synthase; Acyl transferase; KEGG: hau:Haur_1873 beta-ketoacyl synthase.
 
 0.960
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.939
EDY21616.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; KEGG: mxa:MXAN_4402 non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 0.919
EDY21614.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
 0.889
EDY17297.1
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bba:Bd1836 fatty oxidation complex, alpha subunit.
  
 0.868
EDY21201.1
PFAM: histone deacetylase superfamily; KEGG: sus:Acid_0301 histone deacetylase superfamily.
   
   0.788
EDY15897.1
PFAM: cobalamin synthesis protein P47K; ArgK protein; cobalamin B12-binding domain protein; KEGG: dol:Dole_2188 methylmalonyl-CoA mutase, large subunit.
    
 0.769
EDY15898.1
methylmalonyl-CoA mutase, large subunit; KEGG: gtn:GTNG_3336 putative methylmalonyl-CoA mutase protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
    
 0.769
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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