STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20457.1TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: protein of unknown function DUF1555; KEGG: bch:Bcen2424_6767 outer membrane autotransporter barrel domain. (1033 aa)    
Predicted Functional Partners:
EDY16626.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: sat:SYN_02546 outer membrane protein.
  
     0.768
EDY16462.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel.
  
     0.766
EDY17807.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: sat:SYN_02546 outer membrane protein.
  
     0.756
EDY17329.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: sat:SYN_02546 outer membrane protein.
  
     0.755
EDY16972.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: sat:SYN_02546 outer membrane protein.
  
     0.740
EDY17077.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel.
  
     0.726
EDY17420.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: rpc:RPC_2993 hemolysin activation/secretion protein.
  
  0.583
EDY15888.1
KEGG: sde:Sde_2497 TonB-like.
   
  0.564
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.551
EDY17416.1
KEGG: rpc:RPC_2915 hypothetical protein.
  
     0.483
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.