Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDY20466.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
EDY20467.1
PFAM: bifunctional deaminase-reductase domain protein; KEGG: fal:FRAAL1884 putative riboflavin/cytosine deaminase (partial).
       0.639
EDY20468.1
KEGG: bba:Bd2942 hypothetical protein.
       0.639
EDY20469.1
Hypothetical protein.
       0.496
EDY20464.1
Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
       0.469
EDY20465.1
PFAM: cyclase/dehydrase; KEGG: fra:Francci3_2853 cyclase/dehydrase.
       0.469
EDY20470.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cno:NT01CX_0727 AP endonuclease family 2 protein.
       0.455
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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