STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20520.1PFAM: aldo/keto reductase; KEGG: nfa:nfa3270 putative oxidoreductase. (290 aa)    
Predicted Functional Partners:
EDY19059.1
PFAM: aldo/keto reductase; KEGG: aba:Acid345_3653 aldo/keto reductase.
  
     0.734
EDY16487.1
PFAM: aldo/keto reductase; KEGG: bja:bll6256 probable dehydrogenase.
 
0.660
EDY20521.1
Hypothetical protein.
       0.523
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.521
EDY20522.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ava:Ava_C0109 short chain dehydrogenase.
    
  0.503
EDY20525.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gvi:glr0293 probable carbonyl reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.495
EDY16402.1
PFAM: aldo/keto reductase; KEGG: nmr:Nmar_0514 aldo/keto reductase.
  
     0.468
EDY20523.1
PFAM: nitroreductase; KEGG: tel:tll2201 nitroreductase.
     
 0.443
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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