STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20586.1PFAM: response regulator receiver; KEGG: tel:tlr0345 two-component response regulator. (121 aa)    
Predicted Functional Partners:
EDY17906.1
PFAM: response regulator receiver; KEGG: sus:Acid_5903 response regulator receiver protein.
 
 0.985
EDY22105.1
KEGG: rxy:Rxyl_2663 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 0.977
EDY22169.1
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: scl:sce7776 two-component hybrid histidine kinase.
 
 0.976
EDY17905.1
PFAM: response regulator receiver; KEGG: sus:Acid_5903 response regulator receiver protein.
 
 0.976
EDY20755.1
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ret:RHE_PF00265 probable two-component sensor histidine kinase/response regulator hybrid protein.
  
 0.964
EDY20756.1
Putative methyl-accepting chemotaxis sensory transducer; PFAM: histidine kinase HAMP region domain protein; KEGG: rle:pRL120718 putative repetitive protein with two-component sensor and regulator motifs.
  
 0.964
EDY22104.1
PFAM: CHASE3 domain protein; KEGG: ana:alr3761 two-component hybrid sensor and regulator.
  
 0.931
EDY16855.1
KEGG: sus:Acid_3859 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein.
 
 0.926
EDY20587.1
PFAM: response regulator receiver; KEGG: afw:Anae109_2365 multi-sensor signal transduction histidine kinase.
  
 0.915
EDY21397.1
PAS/PAC sensor hybrid histidine kinase; KEGG: ana:all0729 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3.
 
  0.913
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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