STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20672.1PFAM: deoxyhypusine synthase; KEGG: gvi:glr1045 deoxyhypusine synthase. (394 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
 0.967
EDY20673.1
Hypothetical protein.
       0.773
EDY17330.1
PFAM: peptidase U32; KEGG: cya:CYA_0765 peptidase, U32 family.
  
     0.499
EDY20674.1
KEGG: pca:Pcar_2688 NAD+ oxidoreductase; Belongs to the histidinol dehydrogenase family.
       0.490
EDY20675.1
PFAM: histidinol dehydrogenase; KEGG: gka:GK3075 histidinol dehydrogenase.
       0.490
EDY17633.1
KEGG: cyb:CYB_0334 Rho termination factor, N-terminal domain protein.
  
     0.479
EDY20679.1
Hypothetical protein; KEGG: hch:HCH_00113 FOG: HAMP domain.
 
     0.458
EDY20806.1
PFAM: CHASE2 domain protein; KEGG: syf:Synpcc7942_0663 putative adenylate/guanylate cyclase.
  
     0.454
EDY20676.1
Hypothetical protein.
       0.448
EDY20671.1
PFAM: Abortive infection protein; KEGG: aba:Acid345_3240 abortive infection protein.
       0.445
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.