node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDY20199.1 | rplA | CfE428DRAFT_2123 | CfE428DRAFT_5605 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.909 |
EDY20199.1 | rplM | CfE428DRAFT_2123 | CfE428DRAFT_0563 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.905 |
EDY20199.1 | rplR | CfE428DRAFT_2123 | CfE428DRAFT_0502 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.897 |
EDY20199.1 | rplT | CfE428DRAFT_2123 | CfE428DRAFT_4433 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.898 |
EDY20199.1 | rplY | CfE428DRAFT_2123 | CfE428DRAFT_1544 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.908 |
EDY20199.1 | rpsB | CfE428DRAFT_2123 | CfE428DRAFT_2906 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | PFAM: ribosomal protein S2; KEGG: mta:Moth_1032 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.901 |
EDY20199.1 | rpsD | CfE428DRAFT_2123 | CfE428DRAFT_0510 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.901 |
EDY20199.1 | rpsF | CfE428DRAFT_2123 | CfE428DRAFT_1542 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.902 |
EDY20199.1 | rpsG | CfE428DRAFT_2123 | CfE428DRAFT_0483 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.896 |
EDY20199.1 | rpsO | CfE428DRAFT_2123 | CfE428DRAFT_3558 | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.898 |
rplA | EDY20199.1 | CfE428DRAFT_5605 | CfE428DRAFT_2123 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Membrane GTPase LepA-like protein; KEGG: cco:CCC13826_0855 GTP-binding protein LepA. | 0.909 |
rplA | rplM | CfE428DRAFT_5605 | CfE428DRAFT_0563 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplA | rplR | CfE428DRAFT_5605 | CfE428DRAFT_0502 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplA | rplT | CfE428DRAFT_5605 | CfE428DRAFT_4433 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplA | rplY | CfE428DRAFT_5605 | CfE428DRAFT_1544 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.997 |
rplA | rpsB | CfE428DRAFT_5605 | CfE428DRAFT_2906 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S2; KEGG: mta:Moth_1032 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplA | rpsD | CfE428DRAFT_5605 | CfE428DRAFT_0510 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
rplA | rpsF | CfE428DRAFT_5605 | CfE428DRAFT_1542 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.998 |
rplA | rpsG | CfE428DRAFT_5605 | CfE428DRAFT_0483 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rplA | rpsO | CfE428DRAFT_5605 | CfE428DRAFT_3558 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |