STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20264.1PFAM: glycosyl transferase group 1; KEGG: rru:Rru_A3107 glycosyl transferase, group 1. (399 aa)    
Predicted Functional Partners:
EDY20265.1
PFAM: glycosyl transferase group 1; KEGG: scl:sce1025 glycosyltransferase.
 
     0.944
EDY20266.1
KEGG: cps:CPS_5021 hypothetical protein.
       0.773
EDY16631.1
PFAM: glycosyl transferase group 1; KEGG: rci:RCIX1465 glycosyltransferase (group 1).
  
     0.727
EDY20257.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: eli:ELI_05315 bacterial sugar transferase.
 
    0.718
EDY18357.1
PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_4436 glycosyl transferase group 1.
  
     0.710
EDY16633.1
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0758 glycosyl transferase group 1.
  
     0.709
EDY18067.1
PFAM: glycosyl transferase group 1; KEGG: gka:GK0841 glycosyltransferase.
 
     0.693
EDY21966.1
PFAM: glycosyl transferase group 1; KEGG: dge:Dgeo_2505 glycosyl transferase, group 1.
  
     0.675
EDY20269.1
PFAM: glycosyl transferase group 1; KEGG: tbd:Tbd_0291 glycosyl transferase, group 1.
 
    
0.668
EDY18358.1
PFAM: glycosyl transferase group 1; KEGG: reh:H16_A2887 glycosyltransferase, probably involved in lipopolysaccharide biosynthesis.
  
     0.658
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.