STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20280.1KEGG: azc:AZC_3958 hypothetical protein. (532 aa)    
Predicted Functional Partners:
EDY20278.1
PFAM: O-antigen polymerase; KEGG: dps:DPPB82 related to polysaccharide transport proteins.
       0.727
EDY20279.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ppd:Ppro_0900 endonuclease/exonuclease/phosphatase.
       0.727
EDY20281.1
PFAM: glycosyl transferase family 2; KEGG: sus:Acid_4352 glycosyl transferase, family 2.
  
 
  0.669
EDY20282.1
PFAM: ABC-2 type transporter; KEGG: ppd:Ppro_2109 ABC-2 type transporter.
       0.537
EDY20283.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4641 ABC transporter related.
       0.537
EDY20284.1
TIGRFAM: methyltransferase FkbM family; KEGG: pub:SAR11_0393 putative SAM-dependent methyltransferase.
       0.505
EDY20277.1
Hypothetical protein; KEGG: bpl:BURPS1106A_A1946 putative cell surface protein.
       0.465
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.