STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19868.1KEGG: net:Neut_2196 hypothetical protein. (316 aa)    
Predicted Functional Partners:
EDY19866.1
PFAM: arsenate reductase and related; KEGG: lic:LIC10022 arsenate reductase; Belongs to the ArsC family.
       0.701
EDY19867.1
KEGG: afw:Anae109_2667 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.701
EDY19869.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sru:SRU_2227 hypothetical protein.
       0.572
EDY19820.1
KEGG: dge:Dgeo_2174 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; Belongs to the carbohydrate kinase PfkB family.
   
    0.559
EDY19870.1
Hypothetical protein.
       0.445
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.