STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19899.1Hypothetical protein; KEGG: sus:Acid_6877 fibronectin, type III domain protein. (546 aa)    
Predicted Functional Partners:
EDY19898.1
KEGG: sru:SRU_1809 hypothetical protein.
 
     0.880
EDY17965.1
SMART: WD-40 repeat protein; KEGG: rrs:RoseRS_4025 NB-ARC domain protein.
    
  0.803
EDY19900.1
PFAM: beta-lactamase domain protein; KEGG: sus:Acid_1840 beta-lactamase domain protein.
       0.799
EDY20755.1
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ret:RHE_PF00265 probable two-component sensor histidine kinase/response regulator hybrid protein.
    
 0.797
EDY20756.1
Putative methyl-accepting chemotaxis sensory transducer; PFAM: histidine kinase HAMP region domain protein; KEGG: rle:pRL120718 putative repetitive protein with two-component sensor and regulator motifs.
    
 0.797
EDY20470.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cno:NT01CX_0727 AP endonuclease family 2 protein.
  
     0.764
EDY16638.1
MCP methyltransferase, CheR-type with PAS/PAC sensor; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: MCP methyltransferase CheR-type; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
 0.752
EDY22104.1
PFAM: CHASE3 domain protein; KEGG: ana:alr3761 two-component hybrid sensor and regulator.
   
 0.750
EDY21708.1
PFAM: Hpt domain protein; KEGG: ppd:Ppro_0903 multi-sensor hybrid histidine kinase.
    
 0.737
EDY19343.1
KEGG: pcu:pc0506 hypothetical protein.
  
     0.711
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.