STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20023.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EDY20021.1
KEGG: tbd:Tbd_0894 conserved hypothetical/unknown protein.
       0.773
EDY20022.1
Hypothetical protein.
       0.773
EDY20024.1
PFAM: Carbohydrate-binding CenC domain protein; KEGG: cth:Cthe_3095 glycosyl transferase, family 39.
       0.613
EDY20025.1
PFAM: aldo/keto reductase; KEGG: hau:Haur_1683 aldo/keto reductase.
       0.440
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.