STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20058.1KEGG: hau:Haur_1170 carbohydrate-binding CenC domain protein. (821 aa)    
Predicted Functional Partners:
EDY17439.1
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ana:alr1903 unknown protein.
  
     0.683
EDY18650.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.634
EDY16298.1
KEGG: rme:Rmet_6194 hypothetical protein.
  
     0.592
EDY20056.1
PFAM: protein of unknown function DUF1552; KEGG: rba:RB9955 hypothetical protein.
       0.544
EDY20057.1
PFAM: PA14 domain protein; Protein of unknown function DUF1588; Protein of unknown function DUF1592; KEGG: rba:RB9957 hypothetical protein-signal peptide and transmembrane prediction.
       0.544
EDY18662.1
KEGG: kra:Krad_3479 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.540
EDY17944.1
SMART: Parallel beta-helix repeat; KEGG: cpy:Cphy_1873 carbohydrate binding family 6.
  
     0.518
EDY16344.1
Conserved repeat domain protein; KEGG: rsa:RSal33209_3166 pseudomonapepsin precursor; TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Immunoglobulin I-set domain protein; Peptidase S53 propeptide; SMART: Pyrrolo-quinoline quinone; Immunoglobulin subtype.
  
     0.516
uxaC
PFAM: Glucuronate isomerase; KEGG: sus:Acid_5330 glucuronate isomerase.
     
 0.515
EDY18256.1
KEGG: sco:SCO7037 secreted protein.
  
  
  0.507
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.