STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY20063.1KEGG: mxa:MXAN_7169 putative lipoprotein. (322 aa)    
Predicted Functional Partners:
EDY20062.1
KEGG: aba:Acid345_1885 hypothetical protein.
       0.776
EDY19922.1
KEGG: dvu:DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family.
  
     0.584
EDY20067.1
KEGG: mxa:MXAN_2477 hypothetical protein.
 
     0.582
EDY20064.1
Hypothetical protein.
       0.536
EDY20065.1
Hypothetical protein.
       0.536
EDY20066.1
Hypothetical protein.
       0.461
EDY20068.1
Hypothetical protein.
       0.461
EDY19605.1
Conserved hypothetical protein; KEGG: cac:CAC2177 uncharacterized protein, CgeB homolog.
  
     0.437
EDY20942.1
PFAM: fatty acid desaturase; KEGG: mxa:MXAN_3855 fatty acid desaturase family protein.
  
     0.408
EDY18125.1
Hypothetical protein; KEGG: sfu:Sfum_3650 conserved hypothetical cytosolic protein.
  
     0.401
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.