STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19528.1PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_3648 outer membrane efflux protein. (439 aa)    
Predicted Functional Partners:
EDY19529.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gsu:GSU1331 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.965
EDY19530.1
KEGG: mxa:MXAN_0988 cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.956
EDY19531.1
KEGG: mxa:MXAN_0988 cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.934
EDY21609.1
PFAM: O-antigen polymerase; KEGG: mca:MCA1173 hypothetical protein.
      
 0.613
EDY20278.1
PFAM: O-antigen polymerase; KEGG: dps:DPPB82 related to polysaccharide transport proteins.
      
 0.613
EDY19586.1
PFAM: O-antigen polymerase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mxa:MXAN_1052 O-antigen polymerase family protein.
      
 0.613
EDY16628.1
PFAM: O-antigen polymerase; KEGG: mca:MCA1173 hypothetical protein.
      
 0.613
EDY19527.1
Hypothetical protein.
       0.572
EDY22250.1
PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1604 putative secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.491
EDY20862.1
PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_4620 secretion protein HlyD.
   
  0.491
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.