STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19334.1TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rxy:Rxyl_0168 FeS assembly protein SufD. (438 aa)    
Predicted Functional Partners:
EDY19332.1
FeS assembly ATPase SufC; KEGG: lin:lin2510 similar to ABC transporter, ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.998
EDY19169.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.950
EDY19628.1
PFAM: aminotransferase class V; KEGG: mes:Meso_2373 aminotransferase, class V.
 
 
 0.902
EDY19168.1
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: sus:Acid_7703 SUF system FeS assembly protein, NifU family.
 
  
 0.821
EDY19333.1
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: nmr:Nmar_0495 FeS assembly protein SufB.
 
    
0.788
EDY22134.1
TIGRFAM: FeS assembly SUF system protein SufT; PFAM: protein of unknown function DUF59; KEGG: noc:Noc_2485 protein of unknown function DUF59.
 
   
 0.785
EDY19779.1
PFAM: aminotransferase class V; KEGG: mxa:MXAN_1570 aminotransferase, class V.
 
 
 0.774
EDY17011.1
PFAM: aminotransferase class V; KEGG: mxa:MXAN_5758 isopenicillin N epimerase.
 
 
 0.762
EDY22135.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: msi:Msm_0263 nitrogen fixation protein, NifU.
  
  
 0.748
EDY19331.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sma:SAV3053 hydrogen peroxide sensitive repressor; Belongs to the Fur family.
     
 0.625
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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