STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19341.1PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nve:NEMVE_v1g178601 predicted protein Pfam: Methyltransf_12 Methyltransf_11 PROSITE: NLS_BP. (251 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.847
EDY19340.1
PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gvi:gll0818 similar to thiol methyltransferase.
 
     0.783
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
     
 0.747
EDY18205.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: net:Neut_2145 ADP-ribosylation/crystallin J1.
  
     0.718
EDY19343.1
KEGG: pcu:pc0506 hypothetical protein.
 
     0.657
EDY19342.1
Hypothetical protein.
       0.572
EDY18992.1
PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afw:Anae109_3313 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.569
EDY22165.1
Chromosome segregation ATPase-like protein; KEGG: lma:LmjF34.0690 hypothetical protein, conserved.
  
     0.498
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
  0.496
EDY20163.1
PFAM: regulatory protein ArsR; transcriptional regulator TrmB; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_5272 transcriptional regulator, ArsR family.
    
 0.481
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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