STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19216.1KEGG: bvu:BVU_0175 putative acetyl xylan esterase. (431 aa)    
Predicted Functional Partners:
EDY20248.1
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: mta:Moth_0735 competence-damaged protein; Belongs to the CinA family.
  
 
  0.662
EDY21153.1
PFAM: FG-GAP repeat protein; KEGG: scl:sce5734 putative protein, similar to esterases.
  
     0.628
EDY17433.1
PFAM: protein of unknown function DUF1080; KEGG: rba:RB6615 probable secreted glycosyl hydrolase.
  
     0.605
EDY18361.1
TIGRFAM: heme-binding protein; KEGG: rba:RB24 similar to L-sorbosone dehydrogenase.
  
     0.575
EDY21722.1
TIGRFAM: heme-binding protein; KEGG: rba:RB24 similar to L-sorbosone dehydrogenase.
  
     0.574
EDY18255.1
KEGG: sus:Acid_6145 oxidoreductase domain protein.
  
     0.570
EDY20956.1
Hypothetical protein; KEGG: rba:RB5312 pectate lyase.
  
     0.563
EDY17758.1
Hypothetical protein; KEGG: rba:RB5312 pectate lyase.
  
     0.552
EDY20726.1
TIGRFAM: heme-binding protein; KEGG: rba:RB728 conserved hypothetical protein-putative cytochrome c.
  
     0.548
EDY17723.1
PFAM: protein of unknown function DUF1080; KEGG: rba:RB9849 hypothetical protein.
  
    0.540
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.